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Teaching ecology and science with Lovecraftian speculative fiction

In this lesson students read passages from classic American science fiction and horror authors such as H. P. Lovecraft; see scenes from related movies; and delve into a collaborative fiction and art project based on these ideas.

In doing so students

* learn about the concept of superorganisms

* learn how to take notes on an organism’s biology and environment

* We then extend the critical thinking skills used here to real life organisms and ecosystems.

Introduction to the project

Mystery Flesh Pit National Park began as a much-loved exercise on r/Worldbuilding. The brainchild of Redditor u/StrangeVehicles, aka designer, illustrator, and writer Trevor Roberts, it has since evolved into a series of imaginary NPS effluvia showcasing the monstrous attraction.

Roberts describes the MFPNP as such:

The Mystery Flesh Pit is the name given to a bizarre natural geobiological feature discovered in the permian basin region of west texas in the early 1970s.

The pit is characterized as an enormous subterranean organism of indeterminate size and origin embedded deep within the earth, displaying a vast array of highly unusual and often disturbing phenomena within its vast internal anatomy.

Following its initial discovery and subsequent survey exploration missions, the surface orifice of the Mystery Flesh Pit was enlarged and internal sections were slowly reinforced and developed by the Anodyne Deep Earth Mining corporation who opened the Pit as a tourist attraction in 1976. In the early 1980s, the site was absorbed into the National Park System which operated and maintained the Mystery Flesh Pit until its sudden closure in 2007.

This section quoted from Welcome to Mystery Flesh Pit National Park, One Redditor’s Colossal Feat of Worldbuilding, Stubby the Rocket, Tor.com

A sample paragraph from this project:

“”While the rural areas of west Texas are known for their sparse populations, one tourist attraction seems to continually generate a steady stream of visitors around vacation seasons. The titular “Mystery Flesh Pit” has been a wellspring of fascination for geologists, biologists, sociologists, engineers and the general public alike. Guests are advised to book age-appropriate tours and activities well in advance of their visit, as only small groups are permitted into the orifice at any given time. That said, pheromonal discharges and the overall aggression level of the MFP can vary with short notice, so visitors should be advised to be prepared for changes in schedule & availability.””

Here’s a realistic period brochure from the US National Park service: Mystery Flesh Pit National Park

You can see the other contributions from this collaborative project here: https://mysteryfleshpit.tumblr.com/archive

* maps

* scientific papers

* advertisements aimed at tourism

*advertisements for the research corporation studying it.

* Newspaper clippings, both mundane, but also revealing dangerous events.

Anatomy & Physiology

This superorganism isn’t real. Yet we ask students to speculate what kind of organs a creature like this would or wouldn’t have, based on the available information.

We can create analogies to real biological phenomenon.

GIF made by SSACC and hosted on imgur.com

Students could work in groups to come up with answers – and they show their mastery of ideas in anatomy, biology, ecology, and physics, when they try to scientifically justify their conclusions.

For instance, they might claim that –

* the organism has, or hasn’t, a skeleton

* the organism has, or hasn’t, its own internal or external parasites

* the organism is or isn’t still growing

* the organism gets energy and/or nutrition from [….]

* it does/doesn’t have a circulatory system, nervous system, brain, etc.

Students learn about superorganisms

What is an organism?

What is a superorganism?

What is a colonial lifeform?

Our resource – colonial animals and superorganisms.

Here are a couple of real, Earthly colonial lifeforms:

What constitutes the difference between life and non-life?

In real life science, as well as in science fiction and horror, an active topic of interest is what is the line between life and death? When do some organisms become dormant? When do they re-emerge from dormancy?

In the works of American author H. P. Lovecraft we read about these ideas in relation to the fictional creations in his mythos. The Great Old Ones such as Cthulhu have lurked in dim places of the cosmos since the beginning of time:

That is not dead which can eternal lie

And with strange aeons even death may die.

 – Abdul Alhazred, Necronomicon

Students can consider

What does it mean for an organism to be dormant?

For how long can organisms survive in a dormant state?

Why do some organisms spend time in a dormant state? How does this effect their need for food, and their production of waste metabolites?

How could an organism like this get the power necessary to live?

How would an organism like this affect the stability of our ecosystem if it became more active?

How does this relate to the idea of  sustainability?

How do causes relate to impacts across various size and temporal scales?

How would humanity react to global environmental/existential crisis?

How would you talk to a student going through an existential crisis about the impacts of superorganisms possibly affecting all life on earth?

This is of real-world relevance: Devastating, catastrophic worldwide environmental disasters have indeed occurred:

Consider megacalderas, supervolcanoes, megathrust earthquakes, comet or meteor impacts, and large igneous provinces.

ELA connections

This project is inspired by the fiction of HP Lovecraft, and the later school of writers who created new books inspired by his works.

A couple of Lovecraftian quotes for those familiar with this literature:

“Iä! Iä! Cthulhu fhtagn! Ph’nglui mglw’nafh Cthulhu R’lyeh wgah-nagl fhtagn”

The Shadow Over Innsmouth, H. P. Lovecraft, Written 1931, published 1936

“That is not dead which can eternal lie, And with strange aeons even death may die.”

“The Call of Cthulhu” H. P. Lovecraft, 1928

Related articles

Could there be a shadow biosphere here on Earth?

search for extraterrestrial intelligence (SETI)

External resources

https://mysteryfleshpit.tumblr.com/

https://www.reddit.com/r/FleshPitNationalPark/

PBS NOVA The search for superorganisms

Natural History – Superorganisms

Learning Standards

This unit addresses critical thinking skills in the Next Generation Science Standards, which are based on “A Framework for K-12 Science Education: Practices, Crosscutting Concepts, and Core Ideas”, by the National Research Council of the National Academies. In this document we read

“Through discussion and reflection, students can come to realize that scientific inquiry embodies a set of values. These values include respect for the importance of logical thinking, precision, open-mindedness, objectivity, skepticism, and a requirement for transparent research procedures and honest reporting of findings.”

Next Generation Science Standards: Science & Engineering Practices
● Ask questions that arise from careful observation of phenomena, or unexpected results, to clarify and/or seek additional information.
● Ask questions that arise from examining models or a theory, to clarify and/or seek additional information and relationships.
● Ask questions to determine relationships, including quantitative relationships, between independent and dependent variables.
● Ask questions to clarify and refine a model, an explanation, or an engineering problem.
● Evaluate a question to determine if it is testable and relevant.
● Ask questions that can be investigated within the scope of the school laboratory, research facilities, or field (e.g., outdoor environment) with available resources and, when appropriate, frame a hypothesis based on a model or theory.
● Ask and/or evaluate questions that challenge the premise(s) of an argument, the interpretation of a data set, or the suitability of the design

Science and engineering practices: NSTA National Science Teacher Association

Next Gen Science Standards Appendix F: Science and engineering practices

Common Core, English Language Arts Standards » Science & Technical Subjects

CCSS.ELA-LITERACY.RST.9-10.1 – Cite specific textual evidence to support analysis of science and technical texts, attending to the precise details of explanations or descriptions.

CCSS.ELA-LITERACY.RST.9-10.2 – Determine the central ideas or conclusions of a text; trace the text’s explanation or depiction of a complex process, phenomenon, or concept; provide an accurate summary of the text.

CCSS.ELA-LITERACY.RST.9-10.4 – Determine the meaning of symbols, key terms, and other domain-specific words and phrases as they are used in a specific scientific or technical context.

CCSS.ELA-LITERACY.RST.9-10.5 –  Analyze the structure of the relationships among concepts in a text, including relationships among key terms (e.g., force, friction, reaction force, energy).

CCSS.ELA-LITERACY.RST.9-10.6 – Analyze the author’s purpose in providing an explanation, describing a procedure, or discussing an experiment in a text, defining the question the author seeks to address.

Opinion: Teachers should require our students to use textbooks

There is a growing trend in schools to ditch textbooks, and have students rely instead on videos, lectures, handouts, and free online texts.

While every way of learning has its place, what would be the result of students leaving high school without learning how to read books and take notes on what they have read?  What impact will this have on their ability to do well in college?

Shay Westlake writes – I am a retired teacher. I taught for 25 years. I am sorry in advance for saying this: I think teachers that do not use the textbook are not doing their students any favors. Imagine if your teachers never used a textbook. How would you have read textbooks in college?

When teaching high school we always had the kids read the chapters. We started the year out showing several different ways to take notes. Then we told them to choose the way they want to take them. At that point we started doing open notes quizzes. When they are done we have them staple their notes to the back of a quiz.

That is how I caught a ring of students that took turns reading and taking notes and giving the typed notes to like 20-25 people. At that point we made them do handwritten notes.

Every year after we told the story and told them we would allow them to type their notes until someone shares typed notes with someone else then everyone would have to do handwritten notes. It never failed in either the first or second quiz we would find the exact typed notes.

As the person above mentioned we would have numerous kids come back and thank us for having them read and take notes. They told us the majority of students did not do that and several would fail in their college classes. They also said it was so much easier to study for tests.

This is not judgmental. I just do not understand why you would teach high school kids and not make them do the hard work to prepare for college.

About the author: Shay Westlake taught for 25 years in Plano ISD. I taught U. S. History, World History and World Geography.

Respiratory viruses (influenza, rhinoviruses, coronaviruses etc)

What is a respiratory virus?

They are viruses that affect your breathing passages.

They cause common cold and flu-like symptoms.

They can cause shortness of breath and in more severe cases cause pneumonia.

Some infect mostly the upper respiratory tract, in the larynx, vocal cords and above.

Others infect mostly the lower respiratory tract symptoms – below the larynx and vocal cords.

and

Symptoms

These vary significantly from person to person.

Aching muscles and joints
Cough and sputum
Fever
Headache
Runny nose
Sneezing
Sore throat
Tiredness

Common complications of respiratory viruses include:

Bronchiolitis – inflammation of small air passages in the lungs

Croup – inflammation and swelling of the voice box (larynx), the windpipe (trachea) and the airways (bronchi)

Pneumonia – lung infection with inflammation

Sinusitis – infection or inflammation of the sinuses

What are the common respiratory viruses?

Influenza virus – “the flu”

The CDC estimates that influenza has resulted in between 9 million – 45 million illnesses, between 140,000 – 810,000 hospitalizations and between 12,000 – 61,000 deaths annually since 2010.

Respiratory syncytial virus

common respiratory virus that usually causes mild, cold-like symptoms. Most people recover in a week or two, but RSV can be serious, especially for infants and older adults.

RSV is the most common cause of bronchiolitis (inflammation of the small airways in the lung) and pneumonia (infection of the lungs) in children younger than 1 year of age in the United States. – CDC

Human parainfluenza viruses (HPIVs)

Human parainfluenza viruses (HPIVs) commonly cause respiratory illnesses in infants and young children. But anyone can get HPIV illness.

Symptoms may include fever, runny nose, and cough. Patients usually recover on their own. However, HPIVs can also cause more severe illness, such as croup or pneumonia.

Metapneumovirus

MPV is associated with 5% to 40% of respiratory tract infections in hospitalized and outpatient children. It is distributed worldwide and, in temperate regions, has a seasonal distribution generally following that of RSV and influenza virus during late winter and spring.

By the age of five, virtually all children worldwide have been exposed. Despite near universal infection during early life, reinfections are common in older children and adults. They may cause mild upper respiratory tract infection (the common cold).

However, premature infants, immunocompromised persons, and older adults >65 years are at risk for severe disease and hospitalization.

from Wikipedia metapneumovirus

Rhinovirus

The most common viral infectious agent in humans. Main cause of the common cold. Exists in three species with at least 160 recognized types.

Coronaviruses

Coronaviruses are a group of related RNA viruses that cause diseases in mammals and birds. In humans and birds, they cause respiratory tract infections that can range from mild to lethal.

Mild illnesses in humans include some cases of the common cold (which is also caused by other viruses, predominantly rhinoviruses), while more lethal varieties can cause SARS, MERS, and COVID-19.

Adenoviruses

Adenoviruses are a type of virus without an outer lipid bilayer, with a double stranded DNA genome. More than 50 distinct types have been in people.

They usually cause mild respiratory infections, the common cold. But they can cause life-threatening multi-organ disease in people with a weakened immune system.

Human bocavirus (HBoV)

HBoV1 is strongly implicated in causing some cases of lower respiratory tract infection, especially in young children. Discovered in 2005.

These are the fourth most common virus in respiratory samples, behind rhinoviruses, respiratory syncytial virus and adenoviruses. Usually causes the common cold although it can also cause very dangerous illness.

Several versions of this virus have been linked to gastroenteritis.

The full role of this emerging infectious disease remains to be known.

– Wikipedia

Main method of transmission is through the air

See this infographic

Image from paper by Jianjian Wei and Yuguo Li. Airborne spread of infectious agents in the indoor environment

In Deep Cleaning Isn’t a Victimless Crime we read

These days, Goldman is extending his crusade against fomite fear from COVID-19 to other diseases. The old story is that if you make contact with a surface that a sick person touched, and then you touch your eyes or lips, you’ll infect yourself.

While Goldman acknowledges that many diseases, especially bacterial diseases, spread easily from surfaces, he now suspects that most respiratory viruses spread primarily through the air, like SARS-CoV-2 does.

“For most respiratory viruses, the evidence for fomite transmission looks pretty weak,” Goldman said. “With the exception of RSV [respiratory syncytial virus], there are few other respiratory viruses where fomite transmission has been conclusively shown.”

For example, rhinovirus, one of the most common viruses in the world and the predominant cause of the common cold, is probably overwhelmingly spread via aerosols. The same may be true of influenza.

Many experiments that suggest surface transmission of respiratory viruses stack the deck by studying unrealistically large amounts of virus using unrealistically ideal (cold, dry, and dark) conditions for their survival. Based on our experience with SARS-CoV-2, these may not be trustworthy studies.

Deep Cleaning Isn’t a Victimless Crime The CDC has finally said what scientists have been screaming for months: The coronavirus is overwhelmingly spread through the air, not via surfaces.  Derek Thompson, The Atlantic, 4/13/2021

Thompson also writes:

It’s quite possible that ALMOST ALL respiratory viruses mostly spread through the air—including rhinovirus (lots of common colds) and the flu. That means the best way to avoid getting sick isn’t power-washing strategies, but ventilation strategies. Think windows over Windex.

Articles

Science Brief: SARS-CoV-2 and Surface (Fomite) Transmission for Indoor Community Environments, CDC, 4/5/2021

People can be infected with SARS-CoV-2 through contact with surfaces. However, based on available epidemiological data and studies of environmental transmission factors, surface transmission is not the main route by which SARS-CoV-2 spreads, and the risk is considered to be low. The principal mode by which people are infected with SARS-CoV-2 is through exposure to respiratory droplets carrying infectious virus.

and

Aerosol Transmission of Rhinovirus Colds, Elliot C. Dick et al., The Journal of Infectious Diseases, Volume 156, Issue 3, September 1987, Pages 442–448, https://doi.org/10.1093/infdis/156.3.442

and

Exaggerated risk of transmission of COVID-19 by fomites, Emanuel Goldman, The Lancet Infectious Diseases, Vol. 20(8), p.892-893, 8/1/2020

 

Misuse or misunderstanding of science

Science isn’t a position or a person. Rather, science is a method that allows us to test claims.

In science we approach claims skeptically. That doesn’t mean that that we don’t believe anything. Rather, to be skeptical means we don’t accept a claim unless we are given compelling evidence.

So while process of science can’t be disingenuous or harmful, certain people have used the word “science” to promote questionable or harmful products.

There are some products which were marketed in the 1800s or early to mid 1900s, which were claimed to be “proven safe by science.” In later years it was found that many of these products never really did what they promised, and that some were even harmful. When this was discovered many people began to think that science was unreliable. They would say things like “Science changes its mind all the time, so why should we believe it?”

That’s a legitimate question, but if someone asks it then should listen to the answers – and there are several:

(A) Very often the advertised product simply wasn’t ever proven scientifically to be effective or safe. Salespeople simply lied.  American laws on advertising have always been very loose; in many ways the laws on some products are still quite loose today.

So if someone lies about a “scientifically proven product,” this doesn’t mean that science is unreliable. It means that the salespeople were unreliable.

(B) Just as often, when a product is first invented, people have only incomplete information. They may have done some testing, they may have involved some doctors, engineers, or scientists, and they may truly believe that their product is a good one. Sometimes positive effects are apparent immediately but harmful effects take time to show up. When this happens, that’s not fraud. It’s the inevitable result of people developing new things. We don’t always know how they will turn out long down the road.

(C) Some scientists knew of the danger, but it wasn’t made clear to the public at that time. For many years newspapers and radios didn’t employ writers with a scientific background. Writers and editors were told about science related stories, or occasionally investigated such stories, but without a highly trained staff they often couldn’t recognize a story worth pursuing and giving to the public. This is true, for example, about the radium being used in many popular products, such as watch dials. I stress to add that in many ways the situation is repeating itself today. Many social media sites used to disseminate news don’t have scientifically educated employees.

As such, issues like this are very important. We need to be very clear in how we discuss them.

This next image is surprising: We see here four advertisements, casually foisting harmful products on the American consumer. Three of these ads are absolutely real. Yet a fourth one is technically “fake,” it was created for a popular videogame, but it (sadly) based on genuine ads touting the supposed medical safety of the product. Can you figure out which is which?

“These ads were not deliberately used to harm people initially but highlight the consequences of not knowing because of not using science or having testing technologies that have been developed since the creation of these products. ”

Cigarettes

For many years, from the 1800s to the mid 1900s, cigarettes were promoted as a great weight loss tool. They were said said to relieve stress, and help one better digest a meal. Cigarette companies paid medical doctors to endorse certain brands of cigarettes as safe and healthy. A number of supposedly scientific research papers were paid for, done, and published, by cigarette companies themselves, and those conclusions were always the same: cigarette smoking is safe.

But by the 1950s doctors had observed a huge increase in lung and throat cancer that seemed to correlate with cigarette usage. Slowly, over time, more and more scientific studies were done on this topic. A simple and clear trend emerged:

Every scientific study done by impartial scientists, with all the data open to reviewers, showed that cigarette smoking was strongly linked to cancer.

Every scientific study paid for by cigarette companies, with hand chosen doctors working for those companies, with much data kept hidden, showed that cigarette smoking was safe.

The conclusions were obvious and undeniable: Cigarette smoking really was causing cancer, this was clearly proven by science, and the few individuals who said otherwise were all on the payroll of cigarette companies.

As such we may conclude – science never claimed or proved that cigarette smoking was safe.  It was only for-profit cigarette companies that made this claim.

When Cigarette Companies Used Doctors to Push Smoking

“The Doctors’ Choice Is America’s Choice” : The Physician in US Cigarette Advertisements, 1930-1953

When Smoking Was Just What the Doctor Ordered

Over the counter heroin use

Heroin is an opioid. It was first developed in 1895 as a medicine to help treat respiratory diseases.

In some countries, in a highly regulated way, it is used medically to relieve pain, such as during childbirth or a heart attack. It is often used illegally and dangerously, as a recreational drug for its euphoric effects.

For many years, many nations allowed heroin to be sold over-the-counter (without a prescription) as a way to treat pain. Since it was discovered by scientists and was sold legally,  some people could conclude that science has decided that this was a safe drug.

However, at this time there were very few, if any, peer-reviewed studies which showed the long term effects of unregulated heroin use.

The Bayer pharmaceutical company started making diacetylmorphine, and its marketing name was heroin. At this point, heroin was available over-the-counter. Heroin was viewed as a cure-all for everything from headaches to the common cold…. At the time, heroin was viewed as a safe alternative to morphine because it was seen as less addictive

By the mid-1800s, opium had become extremely popular, with opium dens located around the world, including in the United States…. Around the 1850s, morphine became available in the U.S. and its use was popular in medicine…. following the Civil War, it started to become clear that morphine had a serious side effect: addiction.

Heroin History Timeline in the U.S., Megan Hull, The Recovery Village, 12/20/2019

By the early 1900s scientists and doctors began to realize that this drug was far more dangerous than initially realized. As data accumulated, people lobbied the government to regular this substance. The first major law to do so was the Harrison Narcotics Tax Act, 1914. It controlled the sale and distribution of opioids; it did allow opioids to be prescribed and sold for medical purposes.

By 1924, the US Congress banned its sale, importation, or manufacture. Heroin is now a Schedule I substance, which makes it illegal for non-medical use in signatory nations of the Single Convention on Narcotic Drugs treaty, including the United States.

Some see this as an example of science falsely saying that a substance was safe, and then changing its mind. That is not so. Sure, in politics changing your position is seen as a weakness. People call it “flip flopping.”  But in science it is a positive value to be open to new ideas. Science encourages us to change you mind if evidence reveals a better way of understanding something. 

Neil Degrasse Tyson

Asbestos

“Asbestos has been mined and used in a variety of materials since Ancient Greece. It wasn’t until maybe the 1950s where the connection to mesothelioma and lung cancer were made.”

Automobile industry

From 1900s to the 1960s the industry falsely claimed that cars were so safe that they didn’t need seatbelts, etc.

Radium

Radium used in lotions and toothpaste and cosmetics and as a healthy glowing elixir /fountain

How We Realized Putting Radium in Everything Was Not the Answer, Taylor Orci, The Atlantic, 3/7/2013

and this is of great historical interest: Radium Historical Items Catalog, By Buchholz and Cervera, Oak Ridge Institute

In the years following the discovery of radium-226 in 1898 by Madame Curie, radium became a novelty product used in everything from medicinal “cures” to children’s toys. At the time, radium was believed to pose negligible risk due to the radiation, and in fact was believed by many to have health benefits. However, over time the risks became apparent, and the use of radium in consumer products was gradually phased out, with the last common consumer application being in luminescent timepieces during the 1960s.

While radium-containing consumer products are no longer generally produced, many of the historically produced items are in circulation, sold in antique stores, held in private collections and displayed in museums. Record keeping by the manufacturers at the time was poor, and most companies that manufactured the products are no longer in existence. This makes identification of these items and finding applicable information difficult.

Under contract with the U.S. Nuclear Regulatory Commission (NRC), Oak Ridge Associated Universities (ORAU) has compiled this catalog of historical items known to or claimed to contain radium, either as a component of uranium ore or as purified radium.

Facts and ideas from anywhere: The Radium Girls, William Clifford Roberts, Proceedings (Baylor University. Medical Center). 2017 Oct; 30(4): 481–490

DDT

DDT (dichlorodiphenyltrichloroethane) is a colorless, tasteless, and almost odorless crystalline compound. Its insecticidal action was discovered in 1939. It was used to limit the spread of insect-born diseases like malaria and typhus.

The DDT issue is complex: Many people today believe that (a) DDT is terribly dangerous, (b) its use was only due to profit induced pseudoscience, and (c) Rachel Carson exposed the danger of this compound, and called for it to be banned.

The problem with those ideas is that none of them are quite correct.

The overriding theme of Rachel Carson’s Silent Spring is the powerful—and often negative—effect humans have on the natural world. Carson’s main argument is that pesticides have detrimental effects on the environment; she says these are more properly termed “biocides” because their effects are rarely limited to the target pests.

DDT is a prime example, but other synthetic pesticides—many of which are subject to bioaccumulation—are scrutinized. Carson accuses the chemical industry of intentionally spreading disinformation and public officials of accepting industry claims uncritically.

Most of the book is devoted to pesticides’ effects on natural ecosystems, but four chapters detail cases of human pesticide poisoning, cancer, and other illnesses attributed to pesticides. About DDT and cancer, Carson says only:

In laboratory tests on animal subjects, DDT has produced suspicious liver tumors. Scientists of the Food and Drug Administration who reported the discovery of these tumors were uncertain how to classify them, but felt there was some “justification for considering them low grade hepatic cell carcinomas.” Dr. Hueper [author of Occupational Tumors and Allied Diseases] now gives DDT the definite rating of a “chemical carcinogen.”

Carson predicts increased consequences in the future, especially since targeted pests may develop resistance to pesticides , and weakened ecosystems fall prey to unanticipated invasive species.

The book closes with a call for a biotic approach to pest control. Carson never called for an outright ban on DDT. She said in Silent Spring that even if DDT and other insecticides had no environmental side effects, their indiscriminate overuse was counterproductive because it would create insect resistance to pesticides, making them useless in eliminating the target insect populations:

No responsible person contends that insect-borne disease should be ignored. The question that has now urgently presented itself is whether it is either wise or responsible to attack the problem by methods that are rapidly making it worse.

The world has heard much of the triumphant war against disease through the control of insect vectors of infection, but it has heard little of the other side of the story – the defeats, the short-lived triumphs that now strongly support the alarming view that the insect enemy has been made actually stronger by our efforts. Even worse, we may have destroyed our very means of fighting.

Carson also said that “Malaria programmes are threatened by resistance among mosquitoes”, and quoted the advice given by the director of Holland’s Plant Protection Service: “Practical advice should be ‘Spray as little as you possibly can’ rather than ‘Spray to the limit of your capacity’ … Pressure on the pest population should always be as slight as possible.”

Excerpted from http://en.wikipedia.org/wiki/Silent_Spring

None of this is meant to suggest that all DDT use is safe. Rather, the point is that how it is used and in what quantities matters. There indeed are dangerous consequences to overuse or inappropriate disposal of DDT.

How a shocking environmental disaster was uncovered off the California coast after 70 years, Jeff Beradelli, CBS News, 4/12/2021

Thalidomide

thalidomide

Podcast – Thalidomide: Justice Delayed, Justice Denied, Erin Welsh and Erin Allman Updyke,, 9/29/2020,

All of this is why the DEA and the EPA were created.

Books

Trust Us We’re Experts: How Industry Manipulates Science and Gambles with Your Future, 2002, Sheldon Rampton and John Stauber

Public relations firms and corporations know well how to exploit your trust to get you to buy what they have to sell: Let you hear it from a neutral third party, like a professor or a pediatrician or a soccer mom or a watchdog group. The problem is, these third parties are usually anything but neutral. They have been handpicked, cultivated, and meticulously packaged in order to make you believe what they have to say—preferably in an “objective” format like a news show or a letter to the editor. And in some cases, they have been paid handsomely for their “opinions.”

Merchants of Doubt: How a Handful of Scientists Obscured the Truth on Issues from Tobacco Smoke to Global Warming

A 2010 non-fiction book by American historians of science Naomi Oreskes and Erik M. Conway. It identifies parallels between the global warming controversy and earlier controversies over tobacco smoking, acid rain, DDT, and the hole in the ozone layer. Oreskes and Conway write that in each case “keeping the controversy alive” by spreading doubt and confusion after a scientific consensus had been reached was the basic strategy of those opposing action. In particular, they show that Fred Seitz, Fred Singer, and a few other contrarian scientists joined forces with conservative think tanks and private corporations to challenge the scientific consensus on many contemporary issues.

Additional sources

Fact check: ‘Trust the science’ critique includes 3 real ads – and one from a video game, Nayeli Lomeli, USA TODAY, 6/30/2021

 A “Nico Time” advertisement that promotes smoking during pregnancy is fake. It was posted in a Fandom page called “BioShock Wiki,” which is dedicated to the video game series BioShock. The site wrote that the advertisement was designed by Kat Berkley, a concept artist who worked on the game.

https://www.reddit.com/r/Bioshock/comments/1qiqhg/good_ol_rapture_advertising/

https://bioshock.fandom.com/wiki/Nico-Time

Learning Standards

A Framework for K-12 Science Education: Practices, Crosscutting Concepts, and Core Ideas (2012)
Implementation: Curriculum, Instruction, Teacher Development, and Assessment
“Through discussion and reflection, students can come to realize that scientific inquiry embodies a set of values. These values include respect for the importance of logical thinking, precision, open-mindedness, objectivity, skepticism, and a requirement for transparent research procedures and honest reporting of findings.”

Next Generation Science Standards: Science & Engineering Practices
● Ask questions that arise from careful observation of phenomena, or unexpected results, to clarify and/or seek additional information.
● Ask questions that arise from examining models or a theory, to clarify and/or seek additional information and relationships.
● Ask questions to determine relationships, including quantitative relationships, between independent and dependent variables.
● Ask questions to clarify and refine a model, an explanation, or an engineering problem.
● Evaluate a question to determine if it is testable and relevant.
● Ask questions that can be investigated within the scope of the school laboratory, research facilities, or field (e.g., outdoor environment) with available resources and, when appropriate, frame a hypothesis based on a model or theory.
● Ask and/or evaluate questions that challenge the premise(s) of an argument, the interpretation of a data set, or the suitability of the design

2016 Massachusetts Science and Technology/Engineering Standards
Students will be able to:
* apply scientific reasoning, theory, and/or models to link evidence to the claims and assess the extent to which the reasoning and data support the explanation or conclusion;
* respectfully provide and/or receive critiques on scientific arguments by probing reasoning and evidence and challenging ideas and conclusions, and determining what additional information is required to solve contradictions
* evaluate the validity and reliability of and/or synthesize multiple claims, methods, and/or designs that appear in scientific and technical texts or media, verifying the data when possible.

El Nino and La Nina

El Niño is the name given to the periodic warming of the ocean that occurs in the central and eastern Pacific.

At irregular intervals of three to seven years, these warm countercurrents become unusually strong and replace normally cold offshore waters with warm equatorial waters.

A major El Niño episode can cause extreme weather in many parts of the world.

What is La Niña? When surface temperatures in the eastern Pacific are colder than average, a La Niña event is triggered that has a distinctive set of weather patterns.

and

and

How does it form?

How do the ocean and atmosphere come together to create thus? This problem took nearly fifty years to solve, even after all of the basic ingredients were uncovered.

The Rise of El Niño and La Niña

 

How this affects the USA – SciJinks – what is La Niña?

How this affects Africa – Weather conditions over the Pacific, including an unusually strong La Niña, interrupted seasonal rains for two consecutive seasons. Between July 2011 and mid-2012, a severe drought affected the entire East African region. Said to be “the worst in 60 years”, it caused a severe food crisis across Somalia, Djibouti, Ethiopia and Kenya that threatened the livelihood of 9.5 million people. Many refugees from southern Somalia fled to neighboring Kenya and Ethiopia. Other countries in East Africa, including Sudan, South Sudan and parts of Uganda, were also affected by a food crisis. Many people died.

 

Live video of El Nino

El Niño, Chris Farley, on Saturday Night Live

 

The full skit is here 🙂 NBC Saturday Night Live classic clip

 

Links

19.3 Regional wind systems breezes El Nino PowerPoint

Chap 19 Air Pressure Coriolis Global winds El Nino

19.3 regional wind systems PDF worksheets

19.3 Regional Wind Systems Teacher chapter

 

Learning Standards

NGSS
HS-ESS2-2. Analyze geoscience data to make the claim that one change to Earth’s surface can create feedbacks that cause changes to other Earth systems.

Disciplinary Core Ideas – ESS2.A: Earth Materials and Systems
 Earth’s systems, being dynamic and interacting, cause feedback effects that can increase or decrease the original changes.

Crosscutting concepts: stability and change – Feedback (negative or positive) can stabilize or destabilize a system.

HS-ESS2-4. Use a model to describe how variations in the flow of energy into and out of Earth’s systems result in changes in climate

DCI – ESS2.D: Weather and Climate – ESS2.A: Earth Materials and System

 The foundation for Earth’s global climate systems is the electromagnetic radiation from the sun, as well as its reflection, absorption, storage, and redistribution among the atmosphere, ocean, and land systems, and this energy’s re-radiation into space.

 

 

 

Le Chatelier’s principle

In the early parts of a chemistry class we think of a chemical reaction as a one-time event: either compounds react, or they don’t react. Nothing.

But quite often the reality is dynamic: Chemical A and B combine to make AB…. but AB breaks apart back into A and B. Then those individual A and B can eventually recombine again into AB. 

So on a microscopic level, individual reactions never cease.

Yet at the macroscopic level, the reaction seems to have come to a stop.

What does happen, is that at any given pressure and temperature, we’ll end up with an equilibrium: there will be a constant, certain amount of separate pieces, and a constant, certain amount of combined pieces.

We can make a ratio of [separate pieces] compared to [combined pieces.]

This ratio is called an equilibrium constant.

Here is a visual of a situation, not about chemical reactions, but about locations. We create a ratio of how much is one one side compared to how much is on another side. 

from blendspace.com/lessons/NiOSxDaHOeAhQA/copy-of-equilibrium-ap-chemistry

 

Online lessons

CK-12 Chemistry LeChatelier’s Principle

CK-12 LeChatelier’s Principle and the Equilibrium Constant

Dynamic Equilibrium and Le Chatelier’s Principle

Opentextbc.ca Shifting Equilibria: Le Chatelier’s Principle

Libretexts Chemistry – Le Chatelier’s Principle

Here is a fantastic infographic by Compound Interest

 

Apps & interactives

PhET apps – Reactions & Rates, and Reversible Reactions

interactives CK-12 Scroll down to “Flat vs Fizyy Soda”

elearning at Cal Poly Pomona – Kinetics, Equilibrium, and then Le Chatelier.

PLIX Le Châtelier’s Principle and the Equilibrium Constant

The Law of Mass Action, Wolfram

Le Chatelier’s Principle in Chemical Equilibrium, Wolfram

 

Constructing an equilibrium expression

See the lesson here Dynamicscience.com equilibrium4

 

Learning Standards

NGSS

HS-PS1-6. Refine the design of a chemical system by specifying a change in conditions that would produce increased amounts of products at equilibrium. Clarification Statement: Emphasis is on the application of Le Chatelier’s Principle and on refining designs of chemical reaction systems, including descriptions of the connection between changes made at the macroscopic level and what happens at the molecular level.

Massachusetts

HS-PS1-6. Design ways to control the extent of a reaction at equilibrium (relative amount of products to reactants) by altering various conditions using Le Chatelier’s principle. Make arguments based on kinetic molecular theory to account for how altering conditions would affect the forward and reverse rates of the reaction until a new equilibrium is established.*

Massachusetts State Assessment Boundaries:
• Calculations of equilibrium constants or concentrations are not expected in state assessment.
• State assessment will be limited to simple reactions in which there are only two reactants and to specifying the change in only one variable at a time.

 

Who invented the…Engine, Auto, Radio, TV, Computer, Smartphone, GPS?

The Difference Engine of Charles Babbage, progenitor to the computer.

Who invented the …

power loom? telephone?

internal combustion engine?  automobile?

radio?  television? computer?

smartphone? GPS?

technology for organ transplantation?

modern light bulb?

Myth – Each of these was invented by someone.

Reality – None of these were developed by just one person.  Instead, each technology developed over time – with contributions from many people.

Consider a recent meme shared on social media about Dr. Gladys West. It is well-intentioned, but ends up concealing as much as it reveals.

While doing important work, she didn’t invent GPS – no one person did.

Instead, we follow the contributions of many people. Here, from left to right are Friedwardt Winterberg, Bill Guier, Frank McClure, and George Weiffenbach.

And here are Roger Easton, Ivan Getting, Bradford Parkinson, and Gladys West.

Let’s look at the story more deeply, which covers decades:

One of the fathers of GPS was Friedwardt Winterberg. Back in 1955 he proposed a test of Einstein’s theory of general relativity.

Winterberg realized that it should be possible to detect the predicted slowing of time in a strong gravitational field; this could be done by using atomic clocks placed in Earth orbit inside artificial satellites.

From “The Elegant Universe”, PBS series NOVA. 2003.

Contrary to the predictions of classical physics, relativity predicts that the clocks on the GPS satellites would be seen by the Earth’s observers to run 38 microseconds faster per day than the clocks on the Earth.

Image found on Gyfcat. Looking for the source.

His experiment was eventually experimentally verified by Hafele and Keating in 1971 by flying atomic clocks on commercial jets.

Without taking such relativistic corrections into account, any position calculated from satellite technology – such as GPS – would quickly drift into error. The error in estimated position would be as much as 10 kilometers per day (6 miles/day.)

The next people who helped create what would become GPS were William Guier and George Weiffenbach. They worked at Johns Hopkins University’s Applied Physics Laboratory (APL.)

When the Soviet Union launched the first artificial satellite (Sputnik 1) in 1957, they decided to monitor its radio transmissions.

Guier and Weiffenbach realized that, because of the Doppler effect, they could pinpoint where the satellite was along its orbit.

In 1958, Frank McClure, the deputy director of the APL, asked Guier and Weiffenbach to investigate the inverse problem – pinpointing the user’s location, given the satellite’s location.

At the time, the US Navy was developing the submarine-launched Polaris missile, which required them to know the submarine’s location.

This led Guier and Weiffenbach, along with other scientists at APL to develop the TRANSIT system. Transit was used by the U.S. Navy to provide location information to its Polaris ballistic missile submarines.

It was also used as a navigation system by Navy surface ships, as well as for surveying. This system went online in 1960.

The next father of GPS would be Roger L. Easton of the Naval Research Laboratory. During the 1960s and early 1970s he developed a navigational system with passive ranging, circular orbits, and space-borne high precision clocks placed in satellites.

Ivan A. Getting of The Aerospace Corporation

In the 1950s, as head of research and engineering at Raytheon Corp., Waltham, Mass., Getting led a project to develop a mobile ballistic missile guidance system called Mosaic, which was to work like the Loran system.

But Getting envisioned another concept. Though the railroad mobile version of the intercontinental ballistic missile was cancelled, he realized that if a similar system were used, one that based the transmitters on satellites, and if enough satellites were lofted so that four were always in sight, it would be possible to pinpoint locations in three dimensions anywhere on earth. This theory led to Navstar.

For GPS, Also Thank Ivan Getting; He Got “the Damn Thing Funded, Tekla Perry, IEEE Spectrum, 4/19/2018

Bradford Parkinson of the Applied Physics Laboratory was the lead architect, advocate and developer of GPS.  He was given full, direct control of the development of the demonstration system, which included satellites, a global ground control system, nine types of user receivers, and an extensive land, sea and air test program

Gladys West analyzed data from satellites, putting together altimeter models of the Earth’s shape. She became project manager for the Seasat radar altimetry project, the first satellite that could remotely sense oceans.

From the mid-1970s through the 1980s, West worked on precise calculations to model the shape of the Earth – a geoid – an ellipsoid with irregularities.

NOAA National Geodetic Survey, from a PPT by Hawaii Geographic Information Coordinating Council

Generating an extremely accurate model required her to employ complex algorithms to account for variations in gravitational, tidal, and other forces that distort Earth’s shape. This was essential for the Global Positioning System (GPS).

Whew…. and all that is just the short version of who invented the GPS. The longer version would literally take a book, a dozen hours of video, and include dozens more people.

Student project

Students will work individually or in groups, researching, and then creating a presentation on the evolution of any of these technologies.

You may propose another technology to investigate; clear it with your teacher first.

power loom? telephone?

internal combustion engine?  automobile?

radio?  television? computer?

smartphone? GPS?

technology for organ transplantation?

modern light bulb?

Many ways to create your report!

Select one of these options

Create a written report using MS Word/Google Docs. This will have images, text, perhaps short animations if you like. If you like, you can use the built-in voice-to-text; this will transcribe your words.

Create a video, using your favorite software & apps. This will have images, text, perhaps short animations if you like. You’ll narrate it. Share the project as a video file with us.

Create a PowerPoint/Google Slides presentation. This will have images, text, perhaps short animations if you like.

Create an Infographic. There are many websites and apps out there to do this. Choose your favorite apps. This will have images, text, perhaps short animations if you like.

Resources

Engineering & Technology History, People, and Milestones PBS Learning Media

Learning Standards

NGSS Science

HS-PS3-3. Design, build, and refine a device that works within given constraints to convert one form of energy into another form of energy.*

Crosscutting concepts – Influence of Science, Engineering and Technology on Society and the Natural World. Modern civilization depends on major technological systems. Engineers continuously modify these technological systems by applying scientific knowledge and engineering design practices to increase benefits while decreasing costs and risks.

Disciplinary Core Idea Progression Matrix – ETS2.B Manufacturing

Grade 6-8. The design and structure of any particular technology product reflects its function. Products can be manufactured using common processes controlled by either people or computers.
Grade 9-10 – Manufacturing processes can transform material properties to meet a need. Particular manufacturing processes are chosen based on the product design, materials used, precision needed, and safety.

History C3 Framework and the National Social Studies Standards

D2.Eco.13.9-12. Explain why advancements in technology and investments in capital goods and human capital increase economic growth and standards of living.

D2.Geo.7.6-8. Explain how changes in transportation and communication technology influence the spatial connections among human settlements and affect the diffusion of ideas and cultural practices.

D2.His.1.9-12. Evaluate how historical events and developments were shaped by unique circumstances of time and place as well as broader historical contexts.

Common Core

CCSS.ELA-LITERACY.W.8.4

Produce clear and coherent writing in which the development, organization, and style are appropriate to task, purpose, and audience.

CCSS.ELA-Literacy.WHST.9-10.6
CCSS.ELA-Literacy.WHST.11-12.6

Use technology, including the Internet, to produce, publish, and update individual or shared writing products, taking advantage of technology’s capacity to link to other information and to display information flexibly and dynamically.

Who invented these technologies evolved Loom Phone GPS radio

Molecular Orbitals

Content objective (What are we learning & why?)

Lewis theory and the octet rule are not enough to describe the shapes of molecules and many of their properties.
To go beyond such limitations we learn molecular orbital theory.

Prerequisites (What do we need to know before starting this unit?)

Lewis structures; the octet rule; covalent & ionic bonds

sub-atomic particles;  s, p, d, and f orbitals

the wave nature of matterSchrödinger model of the atom

Shorthand notation reminder

e- = electron

Introduction

By this time it may be no surprise to you that the name of this theory – molecular orbitals – is a misnomer. There are no orbitals involved.

We should really call this

“Three dimensional electron-clouds, overlapping with other three dimensional electron-clouds, to make even more complicated and pretty electron-clouds theory”

But that’s way too many words. So “molecular orbitals” it is 😉

Remember, electrons are not solid objects like billiard balls.

And e- don’t really orbit an atom’s nucleus.

Electrons are better described as a rippling waves.

How does the Schrödinger equation create orbitals?

When we interact with e- in certain ways, sure they have particle-like properties.

But most of the time they have wave-like properties.

If you feel like it, you can learn a bit about quantum mechanics here.

What does this mean? When atoms get close to each other, the 3D wave function of one e- overlaps with the 3D wave function of another e-.

This creates constructive interference and destructive interference:

high parts of one wave combine with high parts of another wave to make even higher waves

A high part of a wave can be canceled out by hitting a low point of another wave.

Electrons work like this – except they have three dimensional waves (the GIF above is only 2D.)

In this unit we’re going to see what happens to the shape of orbitals when atoms come close enough to bond with each other.

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This next section has been adapted from Prentice Hall Chemistry by Wilbraham, Staley, Matta and Waterman.

Sigma Bonds

Atomic orbitals can combine to form a molecular orbital that is symmetrical around the axis connecting atomic nuclei. This is called a sigma bond.

We use the Greek letter sigma (σ).

Covalent bonding results from an imbalance between the attractions and repulsions of the nuclei and e- involved.

This next image is from Valence Bond Theory, LibreTexts

Because their charges have opposite signs, the nuclei and e- attract each other.

Because their charges have the same sign, nuclei repel other nuclei, and e- repel other e-.

In a hydrogen molecule (H2), the nuclei repel each other, as do the e-.

In a bonding molecular orbital of hydrogen, however, the attractions between the H nuclei and the e- are stronger than the repulsions.

The balance of all the interactions between the H atoms is thus tipped in favor of holding the atoms together.

The result is a stable, diatomic molecule of H2.

Atomic p orbitals can also overlap to form molecular orbitals.

A fluorine atom, for example, has a half-filled 2p orbital.

When two fluorine atoms combine then the p orbitals overlap to produce a bonding molecular orbital.

There is a high probability of finding a pair of e- between the positively charged nuclei of the two fluorines.

The fluorine nuclei are attracted to this region of high e- density.

This attraction holds the atoms together in the fluorine molecule (F2).

The overlap of the 2p orbitals produces a bonding molecular orbital that is symmetrical when viewed around the F⎯F bond axis connecting the nuclei.

Therefore, the F⎯F bond is a sigma bond.

Pi bonds, π bonds

“Pi” is symbolized by the Greek letter π.

In the sigma bond of the F2 molecule, the p atomic orbitals overlap end-to-end.

In some molecules, however, orbitals can overlap side-by-side.

The side-by-side overlap of atomic p orbitals produces pi molecular orbitals.

When a pi molecular orbital is filled with two electrons, a pi bond results.

In a pi bond, the bonding e- are most likely to be found in sausage-shaped regions above and below the bond axis of the bonded atoms.

It is not symmetrical around the F⎯F bond axis.

Atomic orbitals in pi bonding overlap less than in sigma bonding.

Therefore, pi bonds tend to be weaker than sigma bonds.

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Bonding and antibonding

When orbitals interact, the result can be bonding or antibonding.

Bonding molecular orbitals

Occurs when the interactions between the orbitals are constructive.

They are lower in energy than the orbitals that combine to produce them.

Antibonding molecular orbitals

Occurs when the interactions between the orbitals are are destructive (out-of-phase.)

The destructive interference creates a long, thin, region where the probability of finding an e- is effectively zero. We call this region a nodal plane.

They are basically an orbital containing an e- outside the region between the two nuclei.

They are higher in energy than the orbitals that combine to produce them.

Do both bonding and antibonding orbitals exist in the same molecule at the same time?

Yes. They both can develop as atoms come together to form a molecule. Both exist at the same time.

The resultant behavior of the molecule depends on how all the orbitals – bonding and antibonding – add together.

Let’s watch Pi orbitals develop

Here we see the Pi bonding orbital forming as P orbitals, from two atoms moving closer, slowly come together.

Pi bonding molecular orbital

Here we see two P orbitals come together to form what is known as the antibonding Pi orbital. Notice that we see a nodal plane develop!

Pi antibonding molecular orbital showing nodal plane

These two animations were created by Mohammad Alhudaithi using Wolfram Alpha. See Visualizing Molecular Orbitals for One Electron Diatomic Molecules.

Example: two O atoms bonding

Here we see 2 O atoms bonding together to create an O2 molecule.

Each atom has its own three-dimensional e- orbitals.

As the atoms get closer the wave functions overlap. The subsequent constructive and destructive interference creates a new three dimensional shape, one for the molecule as a whole.

The original 2s and 2p atomic orbitals merge to create Sigma and Pi orbitals. These bind the atoms together.

The 1s orbitals do not combine and still show the individual atoms.

This GIF is from O2 Molecular Orbitals Animation at Wikimedia by Kilohn Limahn.

________________________________________

Deep thoughts

Because arguments based on atomic orbitals focus on the bonds formed between valence electrons on an atom, they are often said to involve a valence-bond theory.

The valence-bond model can’t adequately explain the fact that some molecules contains two equivalent bonds with a bond order between that of a single bond and a double bond.

The best it can do is suggest that these molecules are mixtures, or hybrids, of the two Lewis structures that can be written for these molecules.

This problem, and many others, can be overcome by using a more sophisticated model of bonding based on molecular orbitals.

Molecular orbital theory is more powerful than valence-bond theory because the orbitals reflect the geometry of the molecule to which they are applied. But this power carries a significant cost in terms of the ease with which the model can be visualized.

Molecular Orbital Theory, Purdue, Chemical Education Division Groups, Bodner Research Web, General Chemistry Help, The Covalent bond

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Deep thoughts

Molecular Orbital theory (MO) is the most important quantum mechanical theory for describing bonding in molecules. It is an approximate theory (as any theory that utilizes “orbitals”), but it is a very good approximation of the bonding.

The MO perspective on electrons in molecules is very different from that of a localized bonding picture such as valence bond (VB) theory.

In VB we describe particular bonds as coming from the overlap of orbitals on atomic centers.

In MO this idea is not completely gone, but now rather than just looking at individual bonds, MO describes the whole molecule as one big system.

The orbitals from MO theory are spread out over the entire molecule rather than being associated with a bond between only two atoms.

Each MO can have a particular shape such that some orbitals have greater electron density in one place or another, but in the end the orbitals now “belong” to the molecule rather than any particular bond.

For diatomic molecules (which we look at a lot), the VB picture and the MO picture are very similar. This is because the whole molecule is simply two atoms bonded together. The difference become more apparent when we look at MO in larger molecules.

Molecular orbitals, Chemistry 301 , Univ of Texas

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Teaching molecular orbitals with the relationships analogy:

This is a great lesson which starts of simple and then brings you into a series of analogy that eventually lets you understand the topic:

From the introduction – “A lot of people say they’re happy being single, and I believe that many likely are. But in the back of their mind of many single people is the thought that if they just found the right person, they might be even happier – or less unhappy, which is a crappy way to look at it psychologically but necessary if you wish to draw a diagram where a “happy couple” is occupying a “potential energy well”, below.”

and then analogies and diagrams grow from here…

Bonding And Antibonding Pi Orbitals, by James Ashenhurst, Master organic chemistry

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Relating molecular orbital theory to quantum mechanics and standing waves

The Lewis Structure approach provides an extremely simple method for determining the electronic structure of many molecules. It is a bit simplistic, however, and does have trouble predicting structures for a few molecules.

Nevertheless, it gives a reasonable structure for many molecules and its simplicity to use makes it a very useful tool for chemists.

A more general, but slightly more complicated approach is the Molecular Orbital Theory. This theory builds on the electron wave functions of Quantum Mechanics to describe chemical bonding.

To understand MO Theory let’s first review constructive and destructive interference of standing waves starting with the full constructive and destructive interference that occurs when standing waves overlap completely.

Molecular Orbital Theory by Philip J. Grandinetti

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Very advanced questions

Valence electrons are associated with molecular orbitals and hybridizations. Do core electrons have molecular/hybridized orbitals, or the original atomic orbitals?

Do core electrons have molecular orbitals?

Apps and interactives

Real-Time Visualization of the Quantum Mechanical Atomic Orbitals, Dauger Research, Atom In A Box, app for Macintosh and iPad

Octet rule exceptions

When we draw electron structures or orbital box diagrams, we are following a pattern, the octet “rule.” But there are many exceptions to this pattern, especially with heavier atoms and transition metals.

See page 190, Prentice Hall Chemistry, Wilbraham et al. Section 7.1 ions.

Article

This section excerpted from 9.6: Exceptions to the Octet Rule, from Chemistry: Principles, Patterns, and Applications by Bruce A. Averill and Patricia Eldredge.

General exceptions to the octet rule include molecules that have an odd number of electrons and molecules in which one or more atoms possess more or fewer than eight electrons.

Molecules with an odd number of electrons are relatively rare in the s and p blocks but rather common among the d– and f-block elements.

Compounds with more than an octet of electrons around an atom are called expanded-valence molecules.

One model to explain their existence uses one or more d orbitals in bonding in addition to the valence ns and np orbitals.

Such species are known for only atoms in period 3 or below, which contain nd subshells in their valence shell.

Learning Objective: assign a Lewis dot symbol to elements not having an octet of electrons in their compounds.

Lewis dot structures provide a simple model for rationalizing the bonding in most known compounds. However, there are three general exceptions to the octet rule:

  1. Molecules, such as NO, with an odd number of electrons;

  2. Molecules in which one or more atoms possess more than eight electrons, such as SF6; and

  3. Molecules such as BCl3, in which one or more atoms possess less than eight electrons.

 

Odd Number of Electrons

Because most molecules or ions that consist of s– and p-block elements contain even numbers of electrons, their bonding can be described using a model that assigns every electron to either a bonding pair or a lone pair.

Molecules or ions containing d-block elements frequently contain an odd number of electrons, and their bonding cannot adequately be described using the simple approach we have developed so far.

There are, however, a few molecules containing only p-block elements that have an odd number of electrons.

Some important examples are nitric oxide (NO), whose biochemical importance was described in earlier chapters; nitrogen dioxide (NO2), an oxidizing agent in rocket propulsion; and chlorine dioxide (ClO2), which is used in water purification plants.

Consider NO, for example. With 5 + 6 = 11 valence electrons, there is no way to draw a Lewis structure that gives each atom an octet of electrons.

Molecules such as NO, NO2, and ClO2 require a more sophisticated treatment of bonding.

Example 1: The NO Molecule. Draw the Lewis structure for the molecule nitrous oxide (NO).

5. There are currently 5 valence electrons around the nitrogen.

A double bond would place 7 electrons around the nitrogen, and a triple bond would place 9 around the nitrogen. We appear unable to get an octet around each atom.

 

More Than an Octet of Electrons

The most common exception to the octet rule is a molecule or an ion with at least one atom that possesses more than an octet of electrons. Such compounds are found for elements of period 3 and beyond.

Examples from the p-block elements include SF6, a substance used by the electric power industry to insulate high-voltage lines, and the SO42− and PO43− ions.

Let’s look at sulfur hexafluoride (SF6), whose Lewis structure must accommodate a total of 48 valence electrons [6 + (6 × 7) = 48].

If we arrange the atoms and electrons symmetrically, we obtain a structure with six bonds to sulfur; that is, it is six-coordinate.

Each fluorine atom has an octet, but the sulfur atom has 12 electrons surrounding it rather than 8.

The third step in our procedure for writing Lewis electron structures, in which we place an electron pair between each pair of bonded atoms, requires that an atom have more than 8 electrons whenever it is bonded to more than 4 other atoms.

Basis of the octet rule

The octet rule is based on the fact that each valence orbital (typically, one ns and three np orbitals) can accommodate only two electrons.

To accommodate more than eight electrons, sulfur must be using not only the ns and np valence orbitals but additional orbitals as well.

Sulfur has an [Ne]3s23p43d0 electron configuration, so in principle it could accommodate more than eight valence electrons by using one or more d orbitals.

Thus, species such as SF6 are often called expanded-valence molecules.

Whether or not such compounds really do use d orbitals in bonding is controversial, but this model explains why compounds exist with more than an octet of electrons around an atom.

There is no correlation between the stability of a molecule or an ion and whether or not it has an expanded valence shell.

Some species with expanded valences, such as PF5, are highly reactive, whereas others, such as SF6, are very unreactive.

In fact, SF6 is so inert that it has many commercial applications. In addition to its use as an electrical insulator, it is used as the coolant in some nuclear power plants, and it is the pressurizing gas in “unpressurized” tennis balls.

An expanded valence shell is often written for oxoanions of the heavier p-block elements, such as sulfate (SO42−) and phosphate (PO43−).

Sulfate, for example, has a total of 32 valence electrons [6 + (4 × 6) + 2]. If we use a single pair of electrons to connect the sulfur and each oxygen, we obtain the four-coordinate Lewis structure

(a). We know that sulfur can accommodate more than eight electrons by using its empty valence d orbitals, just as in SF6.

An alternative structure (b) can be written with S=O double bonds, making the sulfur again six-coordinate.

We can draw five other resonance structures equivalent to (b) that vary only in the arrangement of the single and double bonds.

In fact, experimental data show that the S-to-O bonds in the SO42− ion are intermediate in length between single and double bonds, as expected for a system whose resonance structures all contain two S–O single bonds and two S=O double bonds.

When calculating the formal charges on structures (a) and (b), we see that the S atom in (a) has a formal charge of +2, whereas the S atom in (b) has a formal charge of 0.

Thus by using an expanded octet, a +2 formal charge on S can be eliminated.

Less Than an Octet of Electrons

Molecules with atoms that possess less than an octet of electrons generally contain the lighter s- and p-block elements.

Especially so for beryllium, typically with just four electrons around the central atom, and with boron, typically with six.

One example, boron trichloride (BCl3) is used to produce fibers for reinforcing high-tech tennis rackets and golf clubs.

The compound has 24 valence electrons and the following Lewis structure:

The boron atom has only six valence electrons, while each chlorine atom has eight.

A reasonable solution might be to use a lone pair from one of the chlorine atoms to form a B-to-Cl double bond:

This resonance structure, however, results in a formal charge of +1 on the doubly bonded Cl atom and −1 on the B atom.

The high electronegativity of Cl makes this separation of charge unlikely and suggests that this is not the most important resonance structure for BCl3.

This conclusion is shown to be valid based on the three equivalent B–Cl bond lengths of 173 pm that have no double bond character.

Electron-deficient compounds such as BCl3 have a strong tendency to gain an additional pair of electrons by reacting with species with a lone pair of electrons.

Example 8

Draw Lewis dot structures for each compound.

(a) BeCl2 gas, a compound used to produce beryllium, which in turn is used to produce structural materials for missiles and communication satellites.

(b) SF4, a compound that reacts violently with water

Include resonance structures where appropriate.

Given: two compounds

Asked for: Lewis electron structures

Strategy:

(A) Use the procedure given earlier to write a Lewis electron structure for each compound. If necessary, place any remaining valence electrons on the element most likely to be able to accommodate more than an octet.

(B) After all the valence electrons have been placed, decide whether you have drawn an acceptable Lewis structure.

Solution:

(A) Because it is the least electronegative element, Be is the central atom. The molecule has 16 valence electrons (2 from Be and 7 from each Cl). Drawing two Be–Cl bonds and placing three lone pairs on each Cl gives the following structure:

(B) Although this arrangement gives beryllium only 4 electrons, it is an acceptable Lewis structure for BeCl2. Beryllium is known to form compounds in which it is surrounded by less than an octet of electrons.

Now let’s draw a structure for SF4:

Sulfur is the central atom because it is less electronegative than fluorine.

The molecule has 34 valence electrons (6 from S and 7 from each F).

The S–F bonds use 8 electrons, and another 24 are placed around the F atoms:

The only place to put the remaining 2 electrons is on the sulfur, giving sulfur 10 valence electrons:

Sulfur can accommodate more than an octet, so this is an acceptable Lewis structure.

Example: Draw Lewis dot structures for XeF4 .

Notes

  • In oxoanions of the heavier p-block elements, the central atom often has an expanded valence shell.

  • Molecules with atoms that have fewer than an octet of electrons generally contain the lighter s- and p-block elements.

  • Electron-deficient compounds have a strong tendency to gain electrons in their reactions.

This section of this resource is available as Creative Commons Non Commercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0)

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Resources

8.7: Exceptions to the Octet Rule, Chemistry: The Central Science by Brown, LeMay, Busten, Murphy, and Woodward

9.6: Exceptions to the Octet Rule Chemistry: Principles, Patterns, and Applications by Bruce A. Averill and Patricia Eldredge

9.11 Exceptions to the Octet Rule, CK-12 Chemistry for High School FlexBook

Exceptions to the Octet Rule, General Chemistry I, Dr. Michael Blaber

8.8 Exceptions to the Octet Rule Chemistry, Prentice Hall

CoreChem:Exceptions to the Octet Rule

 

Why are there exceptions to the octet rule?

Because the octet “rule” was never a rule in the first place.

https://www.quora.com/What-is-the-octet-rule-in-chemistry-Are-there-any-exceptions-to-it

https://www.quora.com/Why-does-boron-violate-the-octet-rule

Advanced Placement Chemistry discussion

Exceptions to the octet rule and resonances

Trihydridoboron, also known as borane or borine, is an unstable and highly reactive molecule with the chemical formula BH
3. The preparation of borane carbonyl, BH3(CO), played an important role in exploring the chemistry of boranes, as it indicated the likely existence of the borane molecule.[1] However, the molecular species BH3 is a very strong Lewis acid. Consequently it is highly reactive and can only be observed directly as a continuously produced, transitory, product in a flow system or from the reaction of laser ablated atomic boron with hydrogen.

See https://www.quora.com/Why-do-incomplete-octets-occur

 

Resonance (Chemistry)

Introduction (all levels)

Abbreviations:  e- = electron

In chemistry we make simple drawings showing the location of each atom in a molecule.

We call these Lewis diagrams or dot diagrams.

Examples:

Here is a slightly more complicated Lewis diagram. This is Tyrosine. Don’t worry about what the molecule is; the point is only that we draw it with simple shapes.

Single lines represent single-bonds between atoms

Double-lines represent double-bonds between atoms

We use Lewis diagrams all the time.

Yet once in a while the rules for making Lewis structures don’t work

Here are three ways that the rules break down, even for a simple molecule:

1. A molecule might have 2 or 3 different ways of being drawn. How do we decide which way is correct? The rules don’t tell us.

2. Using the same example (ozone) the rules seem to want us to draw it as a straight line. Yet experimental measurements show that ozone is bent.

Hmm, the rules fail to predict if a molecule is straight or bent.

electron clouds of ozone molecule

3. The rules sometimes compel us to make double bonds on side of a molecule, and single bonds on the other side.

Double bonds are stronger, holding atoms closer together, so they are shorter length.

Single bonds are weaker, holding atoms less close together, so they are longer length.

Yet sometimes experimental measurements of a molecule show that all bonds are the same length.

Consider the possible Lewis structures for ozone: Either way, some bonds are shorter while others are longer. Yet the 3D electron map for ozone (above) shows that all bond lengths are identical.

The rules, clearly, are incorrect: Neither model is correct enough.

Takeaway: Even for small, simple molecules, Lewis structure rules can fail in multiple ways.

This is a problem yet also an opportunity: In physics, when a rule break down, that means the “rule” is really a simplified case of a more general rule.

Imperfect assumptions -> imperfect rules

What assumptions were behind Lewis structure rules?

Atoms assumed to be like tiny solar system.

protons, neutrons, and e- are assumed to be in in one location or in another. location.

Yet experiments prove that e- aren’t like tiny billiard balls at all.

They aren’t solid objects!

We’ll need some quantum mechanics to figure out what e- really are, but for now we can say this:

      e- act like a cloud of energy that spreads out.

Resonance: Fudging drawing rules to make them fit real world measurements

When more than one possible Lewis structure for a molecule can be drawn, resonance is a trick in which we draw all possible forms, and say that the real molecule is an average of each separate drawing.

We call this a resonance hybrid model.

Several Lewis structures are collectively describe the true structure.

Example: Benzene is a hydrocarbon, C6H6. The Lewis rules are ambiguous. We could draw it either way. Which structure is right? Neither!

We just draw both possibilities, and say that the real molecule is an average of the two possibilities.

The real structure is an average of the two different drawings. (See the top 2 drawings here.)

The bottom picture is a way to symbolize that some of these e- aren’t in the left form, or the right form, but are really sort of evenly spread out.

Now combine this idea with what we learned previously in chemistry:

There are many different ways to draw the same molecule.

All of the following are different ways of showing benzene.

Honors: ozone

According to experimental evidence from microwave spectroscopy, ozone is a bent molecule.

The central atom is sp² hybridized with one lone pair.

It can be represented as a resonance hybrid with two contributing structures, each with a single bond on one side and double bond on the other.

Here’s one way to draw the resonance structures of ozone.

Here is a better way of drawing it, with the experimentally determined angles.

 

External links

TBA

Learning Standards

NGSS

HS-PS1-1. Use the periodic table as a model to predict the relative properties of elements based on the patterns of electrons in the outermost energy level of atoms.

NGSS Evidence Statement – Students predict the following patterns of properties:
i. The number and types of bonds formed (i.e. ionic, covalent, metallic) by an element and
between elements;

College Board Standards for College Success: Science

Objective C.1.2 Electrons
Students understand that the interactions of electrons between and within atoms are the primary factors that determine the properties of matter.

ESSENTIAL KNOWLEDGE – Students apply, as well as engage and reason with, the following concepts in the performance expectations:

• Atoms can bond to form molecules, ionic lattices, network covalent structures or materials with metallic properties. Each of these types of structures has different, yet predictable, properties that depend on the identity of the elements and the types of bonds formed.

• The forces of attraction between the particles in molecules, ionic lattices, network covalent structures or materials with metallic properties are called chemical bonds.

• The bonds in most compounds fall on a continuum between the two extreme models of bonding: ionic and covalent.

• An ionic bond involves the attraction between two oppositely charged ions, typically a positively charged metal ion and a negatively charged nonmetal ion. An ion attracts oppositely charged ions from every direction, resulting in the formation of three-dimensional lattices.

• Covalent bonds typically involve at least two electrons shared between the bonding atoms. Nonmetal atoms usually combine by forming one or more covalent bonds between atoms. Covalent bonding can result in the formation of structures ranging from
small molecules to large molar mass biopolymers and three-dimensional lattices (e.g., a diamond).

Objective C.1.4 Representations of Matter
Students understand that atoms, molecules and ionic substances can be represented with a variety of models.

C-PE.1.4.1 Translate among representations (including molecular formulas, Lewis structures, ball-and-stick models and space-filling models) of macroscopic, atomic–molecular and symbolic levels of matter. Compare and contrast the types of information that can be inferred from the different representations. Choose the most appropriate representation to illustrate a physical or chemical process

C-PE.1.4.2 Construct Lewis structures for simple molecules, showing all bonds and lone pairs of electrons for simple molecules. Using regions of electron density, predict electron pair geometry and the shape of the molecule from the arrangement of the atoms in space.